controlStatus {limma}R Documentation

Get Spot Status from Spot Types

Description

Determine the type (or status) of each spot in the gene list.

Usage

controlStatus(types, genes)

Arguments

types dataframe containing spot type specifiers, usually input using readSpotTypes
genes dataframe containing gene IDs and Names, or an RGList or MAList containing this dataframe

Details

This function matches up the regular expressions associated with spot types with the gene list.

Value

Character vector specifying the type (or status) of each spot on the array

Author(s)

Gordon Smyth

See Also

An overview of LIMMA functions for reading data is given in 3.ReadingData.


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