intactInteraction-class {Rintact} | R Documentation |
Class "intactInteraction"
Description
A class representing interaction data.
Objects from the Class
Objects are usually created by psi25interaction
.
Slots
intact
:- character, IntAct ID of the interaction.
interactionType
:- character, the method used for detecting
the interaction, such as pull down.
expPubMed
:- character, PubMed ID of the publication that
describes the experiment.
expIntAct
:- character, IntAct ID of the experiment.
confidenceValue
:- character, confidence value of the experimental interaction.
bait
:- character, UniProt ID of the bait.
prey
:- character, UniProt ID(s) of the prey(s).
inhibitor
:- character, UniProt ID of the inhibitor, NA is missing.
neutralComponent
:- character, UniProt ID of the neutral components, NA is missing.
Methods
- show
signature(object = "intactInteraction")
: a print method
- bait
signature(object = "intactInteraction")
: a method to find
all the baits within the intactInteraction class and print them
- prey
signature(object = "intactInteraction")
: a method to find
all the prey within the intactInteraction class and print them
Author(s)
Nianhua Li
See Also
psi25interaction
[Package
Rintact version 1.2.0
Index]