interactions {Rintact}R Documentation

A function that obtains the interaction information from the IntAct repository.

Description

The interactions function takes a interactionEntry class and returns all the interactions parsed from the PSI-25MI file upon which the interactionEntry class is based.

Usage

interactions(x)

Arguments

x An interactionEntry class.

Value

A list of intactInteraction objects. The intactInteraction objects contain information about the experiment, the interaction type, the author's confident value, and the bait and prey proteins.

Author(s)

T Chiang

References

The IntAct Database http://www.ebi.ac.uk/intact/site/contents/downloads.jsf.

See Also

interactionEntry-class

Examples

# parse complex data

[Package Rintact version 1.2.0 Index]