AffySNPPDInfoPkgSeed-class {pdInfoBuilder} | R Documentation |
This class represents Platform Design (PD) packages for Affymetrix mapping (SNP chip) arrays.
Objects can be created by calls of the form new("AffySNPPDInfoPkgSeed", ...)
.
cdfFile
:"files/Mapping250K_Nsp.cdf"
csvAnnoFile
:"files/Mapping250K_Nsp_annot.csv"
csvSeqFile
:Mapping250K_Nsp_probe_tab
chipName
:manufacturer
:genomebuild
:pdInfoObjectName
:geometry
:name
:version
:license
:author
:email
:url
:biocViews
:
Class "PDInfoPkgSeed"
, directly.
Class "PkgSeed"
, by class "PDInfoPkgSeed", distance 2.
See showMethods(classes="AffySNPPDInfoPkgSeed")
Seth Falcon
showClass("AffySNPPDInfoPkgSeed") cdfFile <- "Mapping250K_Nsp.cdf" csvAnno <- "Mapping250K_Nsp_annot.csv" csvSeq <- "Mapping250K_Nsp_probe_tab" pkg <- new("AffySNPPDInfoPkgSeed", version="0.1.5", author="A. U. Thor", email="au@thor.net", biocViews="AnnotationData", genomebuild="NCBI Build 35, May 2004", cdfFile=cdfFile, csvAnnoFile=csvAnno, csvSeqFile=csvSeq) showMethods(classes=class(pkg))