plotVST {lumi} | R Documentation |
plotVST(x, transFun = NULL, plotRange = NULL, addLegend = TRUE, ...)
x |
a LumiBatch object after lumiT transform, or a matrix or data.frame with VST parameter |
transFun |
a character vector of transformation function (asinh or log2) |
plotRange |
the plot range of untransformed data |
addLegend |
add legend or not |
... |
other parameter used by plot function |
invisibly return the untransformed and transformed values.
Pan Du
## load example data data(example.lumi) ## Do default VST variance stabilizing transform lumi.T <- lumiT(example.lumi, ifPlot=TRUE) ## plot the transform function plotVST(lumi.T)