adjBinFUN |
Computes change in LxC measure |
apEX |
Example data set for apComplex package |
apEXG |
Example data set for apComplex package |
bhmaxSubgraph |
Find maximal BH-complete subgraph |
findComplexes |
Estimate a Protein Complex Membership Graph (PCMG) using protein complex comembership data from AP-MS technology |
fisherFUN |
Computes change in LxC measure |
gavin06FilteredEstimates |
AP-MS data complex estimates |
gavinBP2006 |
Tandem Affinity Purification (TAP) Data from Gavin et al. (2006) |
gavinBP2006graph |
Tandem Affinity Purification (TAP) Data from Gavin et al. (2006) |
HMSPCI |
High-Throughput Mass Spectromic Protein Complex Identification (HMS-PCI) Data from Ho, et al. (2002) |
HMSPCIgraph |
High-Throughput Mass Spectromic Protein Complex Identification (HMS-PCI) Data from Ho, et al. (2002) |
Krogan |
High-Definition Macromolecular Composition of Yeast RNA-Processing Complexes (2004) |
krogan06FilteredEstimates |
AP-MS data complex estimates |
kroganBPMat2006 |
Tandem Affinity Purification (TAP) Data from Krogan et al. (2006) |
LCjoin |
Computes change in LxC measure |
LCjoinadjBin |
Computes change in LxC measure |
LCjoinfisher |
Computes change in LxC measure |
LCjoinLchange |
Computes change in LxC measure |
MBMEcHMSPCI |
HMSPCI data complex estimates |
MBMEcKrogan |
Krogan data complex estimates |
MBMEcTAP |
TAP data complex estimates |
mergeComplexes |
Iteratively combine columns in initial PCMG estimate |
SBMHcHMSPCI |
HMSPCI data complex estimates |
SBMHcTAP |
TAP data complex estimates |
sortComplexes |
Sort complex estimates |
TAP |
Tandem Affinity Purification (TAP) Data from Gavin et al. (2002) |
TAPgraph |
Tandem Affinity Purification (TAP) Data from Gavin et al. (2002) |
UnRBBcHMSPCI |
HMSPCI data complex estimates |
UnRBBcTAP |
TAP data complex estimates |
yNameTAP |
TAP data complex estimates using standard gene names |
yTAP |
yTAP Complexes published Gavin, et al. (2002). |