plotDeg {affycoretools} | R Documentation |
These functions make density and RNA degradation plots with automatic placement of legends.
plotDeg(dat, filenames = NULL) plotHist(dat, filenames = NULL)
dat |
An AffyBatch object, or in the case of
plotHist , a matrix (e.g., from a call to
read.probematrix . Note that plotDeg requires an
AffyBatch object to work correctly. |
filenames |
Filenames that will be used in the legend of the
resulting plot. If NULL (the default), these names will be
extracted from the sampleNames slot of the AffyBatch object. |
These functions are called only for the side effect of making the plots. Nothing else is returned.
James W. MacDonald <jmacdon@med.umich.edu>
library(affy) data(affybatch.example) plotDeg(affybatch.example) plotHist(affybatch.example)