getans2 {affycoretools}R Documentation

Interactive Functions for limma2anaffy

Description

These are internal functions used to filter the number of genes for limma2annaffy as well as to automagically get required annotation packages for annaffy.

Usage

getans2(msg, allowed = c("a", "c"))
getfldfil()
getpfil()

Arguments

msg A character string to pass to the end user.
allowed A character vector of acceptable responses.

Details

These functions were added primarily for the error checking they afford. Now the end user can filter the number of genes based on p-value and fold change, and incorrect values entered will not result in unexpected behaviour.

Author(s)

James W. MacDonald <jmacdon@med.umich.edu>


[Package affycoretools version 1.8.1 Index]