extractStats {affycoretools} | R Documentation |
This is a utility function that can be used to extract the statistics
for a set of probesets from an MArrayLM
object. This may be useful for others, but currently is considered an
internal function and is not intended to be called by end users.
extractStats(prbs, fit, comp, statistics)
prbs |
A vector of probe IDs |
fit |
An MArrayLM object |
comp |
Numeric vector of length one, designating which comparison
to select from the MArrayLM object |
statistics |
Any or all of 'tstat', 'pval', 'FC', used to control
the output of statistics from the MArrayLM
object |
This is an internal function used to return a named list of
statistics, which can then be passed to probes2table
for
creating HTML and/or text tables.
A named list that can have up to three vectors of statistics.
James W. MacDonald <jmacdon@med.umich.edu>