AnnotatedSnpCopyNumberSet-class {SNPchip} | R Documentation |
Container for copy number data
Objects can be created by calls of the form new("AnnotatedSnpCopyNumberSet", phenoData, experimentData, annotation, copyNumber, cnConfidence, snpLocation, chromosomeAnnotation, chromosome)
.
chromosomeAnnotation
:data.frame
assayData
:AssayData
phenoData
:AnnotatedDataFrame
experimentData
:MIAME
featureData
:AnnotatedDataFrame
. Contains annotation for the SNP's,
such as chromosome, physical position, and alleles. annotation
:.__classVersion__
:Versions
Class SnpCopyNumberSet
, directly.
Class eSet
, by class SnpCopyNumberSet
.
Class VersionedBiobase
, by class SnpCopyNumberSet
.
Class Versioned
, by class SnpCopyNumberSet
.