cutplot.dendrogram {Heatplus}R Documentation

Plot Subtrees of a Dendrogram in Different Colors

Description

Plot a dendrogram, cut the tree at a given height, and draw the resulting subtrees in different colors.

Usage

cutplot.dendrogram(x, h, cluscol, leaflab = "none", horiz = FALSE, lwd = 3, ...)

Arguments

x a dendrogram.
h the height at which the dendrogram is cut.
cluscol the colors used for the subtrees; defaults to rainbow.
leaflab indicates how leaf labels are to be drawn< defaults to 'perpendicular'.
horiz logical indicating whether to plot the dendrogram horizontally or vertically.
lwd the line width used for the color subtrees.
... arguments to plot.dendrogram.

Details

This routine makes use of the functions plot.dendrogram and plotNode in package stats.

Author(s)

Alexander Ploner <Alexander.Ploner@ki.se>

See Also

as.dendrogram

Examples

data(swiss)
cc = as.dendrogram(hclust(dist(swiss)))
cutplot.dendrogram(cc, h=80)

[Package Heatplus version 1.6.0 Index]