subset.DNAcopy {DNAcopy} | R Documentation |
Function to return a subset of a copy number array data object by a list of chromosomes and sample.
subset.DNAcopy(x, chromlist=NULL, samplelist=NULL, ...)
x |
DNAcopy object |
chromlist |
chromosomes of interest. Should be a subset of the valid chromosome names in the original data. |
samplelist |
samples of interest. Can be integers denoting the samples of interest or a vector of valid sample names. |
... |
other arguments which may be passed to subset . |
An object of class DNAcopy
with the input data and the results
of segmenting them only for the chromosomes and samples of interest.