htmloutput {BeadExplorer}R Documentation

Produce an html summary report

Description

Produces an HTML output summary report

Usage

htmloutput(rbeadData, nbeadData, beadQC, arrayfilepath = NULL, samplefilepath = NULL, resultsfilepath = NULL, 
bkdcol = "MidnightBlue", titlecol = "Yellow", textcol = "Khaki", linkcol = "White", headercol = "White", 
namecol = "LightGreen", linecol = "Red")

Arguments

rbeadData An unnormalised beadData-class object
nbeadData A normalised beadData-class object
beadQC A beadQC-class object
arrayfilepath A filename to link to the array QC plots
samplefilepath A filename to link to the sample QC plots
resultsfilepath A filename to link to the results file
bkdcol The background colour to use
titlecol The colour to use for the title
textcol The colour to use for the text
linkcol The colour to use for linked text
headercol The colour to use for the header text
namecol The colour to use for the name text
linecol The colour to use for the lines

Details

Should not be required by the user. This function is incorporated in to the wrapper beadAnalysis function.

Value

A html file is written with the analysis name using the filename

Author(s)

Gareth Elvidge gareth.elvidge@well.ox.ac.uk

See Also

See Also as help

Examples






[Package BeadExplorer version 1.2.0 Index]