dotplotQC {BeadExplorer} | R Documentation |
Plots a series of dotplots for a BeadChip QC data
dotplotQC(beadData, beadQC, qc, subset, col = NULL, currentcol = "black", meansym = 4, arraysym = 19, currentsym = 19, meansize = 1.5, arraysize = 1.5, currentsize = 1.5, ...)
beadData |
Object of class beadData-class |
beadQC |
Object of class beadQC-class |
qc |
data.frame created by readQC |
subset |
A numerical vector, denoting the columns of QC to plot |
col |
A vector of colours used to plot each array type |
currentcol |
The colour used to identify the current analysis |
meansym |
The symbol used to identify the mean |
arraysym |
The symbol used to identify the each analysis |
currentsym |
The symbol used to identify the current analysis |
meansize |
The size of the symbol used to identify the mean |
arraysize |
The size of the symbol used to identify each analysis |
currentsize |
The size of the symbol used to identify the current analysis |
... |
Arguments passed to points |
This function is primarily an internal function and should not need to be called by the user. The function is used to plot each
indivdual dotplot graph by dotplotArrays
.
None
Gareth Elvidge gareth.elvidge@well.ox.ac.uk
dotplotArrays
, boxplotArrays
,boxplotQC
## Not run: data(examplebeadData) data(examplebeadQC) data(exampleQC) boxplotQC(examplebeadData, examplebeadQC, exampleQC,subset=c(1,4,3,2)) ## End(Not run)