extract {BeadExplorer}R Documentation

Extract columns from a BeadStudio file

Description

Extract columns from a BeadStudio 'gene profile.csv' file

Usage

extract(filenames = NULL, match = "AVG_Signal", verbose = TRUE)

Arguments

filenames A character file path of a 'gene profile.csv' file
match A term to identify the columns to extract
verbose Logical, should a commentary be provided

Details

This function extracts certain columns from the BeadStudio 'gene profile.csv' output file that contain the 'match' arguments in the column header.

Value

A data.frame of extracted columns

Author(s)

Gareth Elvidge gareth.elvidge@well.ox.ac.uk

Examples

## Not run: 
##Extract columns representing detection calls
#extract(match="Detection")

##Extract columns representing number of beads used to analyse each transcript
#extract(match="Avg_NBEADS")
## End(Not run)

[Package BeadExplorer version 1.2.0 Index]