getAnnot {BeadExplorer} | R Documentation |
Obtain annotation information for a given Illumina gene ID
getAnnot(id, manifest, searchFields = c("Target"), returnFields = "all")
id |
A character or vector corresponding to the Illumina gene ID(s) |
manifest |
A data.frame of manifest data as produced by readManifest |
searchFields |
The manifest column name to search for ID |
returnFields |
The manifest column names to return, use "all" to return all columns |
Obtain annotation information for a given Illumina gene ID(s)
A data.frame
containing annotation information for a given gene ID(s).
Gareth Elvidge gareth.elvidge@well.ox.ac.uk
See Also as help
, readManifest
## Not run: man<-readManifest("d:\Bead_Set_Manifest\Human_WG-6.csv") getAnnot("GI_23097300-A", man) getAnnot(c("GI_23097300-A", "GI_21070955-A", "GI_4505876-A"), man) # search for the gene symbol "NDRG1" in the "Symbol" column of the manifest file getAnnot("NDRG1", man, searchFields="Symbol") ## End(Not run)