Vignettes of package tilingArray
- segmentation.pdf:
- Identifying transcript boundaries and confidence intervals from high-density Affymetrix genechip expression data,
estimation of confidence intervals, and visualization
- findsegments.pdf:
- A more basic intro to the segment function for fitting a piecewise constant curve
- costMatrix.pdf:
- Calculation of the cost matrix in the costMatrix function
- assessNorm.pdf:
- The function normalizeByReference
for probe-sequence dependent response adjustment from
a (set of) reference hybridizations.