tilingArray-package | tilingArray package overview |
breakpoints.breakpointsPretend | Accessor methods for breakpointsPretend objects - not to be called by the user. |
comparisonPlot | Plot a vertical layout of panels for the comparison of different along-chromosome profiles. |
confint | The class segmentation represents a segmentation result. |
confint,segmentation-method | The class segmentation represents a segmentation result. |
costMatrix | Segmentation cost matrix |
findSegments | Fit a piecewise constant curve to a sequence of numbers - OBSOLETE, please use function segment instead. |
logLik | The class segmentation represents a segmentation result. |
logLik,segmentation-method | The class segmentation represents a segmentation result. |
normalizeByReference | Probe-specific normalization of hybridization intensities from a short-oligo microarray |
otherStrand | Return the name of the opposite strand |
plot,segmentation-method | The class segmentation represents a segmentation result. |
plotAlongChrom | Plot signals and segmentation along a chromosomal region |
posMin | Find the smallest positive number in a vector |
readCel2eSet | Read celfiles into an eSet object. |
residuals.breakpointsPretend | Accessor methods for breakpointsPretend objects - not to be called by the user. |
sampleStep | Sampling of ascending numbers to ensure minimal spacing. |
segment | Fit a piecewise constant curve: segmentation by dynamic programming |
segmentation-class | The class segmentation represents a segmentation result. |
show,segmentation-method | The class segmentation represents a segmentation result. |
tilingArray | tilingArray package overview |