ROCDATA {msbase}R Documentation

Transformation and other factors of the pairwise peak-lists Comparsion Process

Description

Scores of the binary and intensity based measures for PMF and MS/MS datasets. The file contains the sensitivity and specificity PAUC obtained for each set of factors. In addition it contains the AUC and max(sum(specificity+sensitivity)). For an analysis of variance, to determine the best performing measures see the Sweave file varan.Rnw in the doc directory of the package.

Usage

data(pmf.binary); data(pmf.intensity);data(msms.binary);data(msms.intensity)

Format

A dataframe with 10 columns and 96 (Binary) or rows.

Details

Column names and they content.

Source

References

Wolski et al. "Transformation and other factors of the peptide MS peak-list comparsion process"(2005) See doc directory of this package

Examples

data(pmf.binary)
data(pmf.intensity)
data(msms.binary)
data(msms.intensity)

[Package msbase version 1.5.0 Index]