copa-package {copa} | R Documentation |
This package is used to compute copa scores, p-values based on permutation, and plots of paired genes.
Package: | copa |
Type: | Package |
Version: | 0.1.0 |
Date: | 2006-01-26 |
License: | LLGPL |
There are two main functions; copa
, which is used to compute the COPA
score for a set of microarrays, and permCopa
, which is used to
calculate permutation based p-values and estimate false discovery rate (FDR).
James W. MacDonald
Maintainer: James W. MacDonald <jmacdon@med.umich.edu>
Tomlins, SA, et al. Recurrent fusion of TMPRSS2 and ETS transcription factor genes in prostate cancer. Science. 2005 Oct 28;310(5748):644-8.