Microarray Time Series and Network Analysis


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Documentation for package `GeneTS' version 2.10.1

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avgp Average Periodogram for Multiple (Genetic) Time Series
caulobacter Microarray Time Series Data for 1444 Caulobacter Crescentus Genes
cor.fit.mixture Fit Mixture Distribution to Estimated Correlation Coefficients
cor0.test Test of Vanishing (Partial) Correlation
dcor0 Distribution of the Vanishing Correlation Coefficient (rho=0) and Related Functions
density.pr Density Estimation Via Poisson Regression
dominant.freqs Dominant Frequencies in Multiple (Genetic) Time Series
ecoli Microarray Time Series Data for 102 E. Coli Genes Genes
fdr.control Controlling the False Discovery Rate in Multiple Testing
fdr.estimate.eta0 Estimate the Proportion of Null p-Values
fisher.g.test Fisher's Exact g Test for Multiple (Genetic) Time Series
g.statistic Robust g Test for Multiple (Genetic) Time Series
ggm.estimate.pcor Graphical Gaussian Models: Small Sample Estimation of Partial Correlation
ggm.list.edges Graphical Gaussian Models: Testing Edges
ggm.make.graph Graphical Gaussian Models: Plotting the Network
ggm.plot.graph Graphical Gaussian Models: Plotting the Network
ggm.simulate.data Graphical Gaussian Models: Simulation of Data
ggm.simulate.pcor Graphical Gaussian Models: Simulation of Networks
ggm.test.edges Graphical Gaussian Models: Testing Edges
hotelling.transform Variance-Stabilizing Transformations of the Correlation Coefficient
ibeta Distribution of the Vanishing Correlation Coefficient (rho=0) and Related Functions
is.constant Simple Check for Constant Time Series
kappa2n Relationship Between Sample Size and the Degree of Freedom of Correlation Distribution
n2kappa Relationship Between Sample Size and the Degree of Freedom of Correlation Distribution
pcor0 Distribution of the Vanishing Correlation Coefficient (rho=0) and Related Functions
periodogram Periodogram Power Spectral Density
rcor0 Distribution of the Vanishing Correlation Coefficient (rho=0) and Related Functions
robust.g.test Robust g Test for Multiple (Genetic) Time Series
robust.spectrum Robust g Test for Multiple (Genetic) Time Series
show.edge.weights Graphical Gaussian Models: Plotting the Network
sm.indexes Some Tools for Symmetric Matrices
sm2vec Some Tools for Symmetric Matrices
vec2sm Some Tools for Symmetric Matrices
z.transform Variance-Stabilizing Transformations of the Correlation Coefficient