recordSticky {simulatorAPMS}R Documentation

This function records the sticky proteins in the simulation of AP-MS

Description

In the actual AP-MS technology, sticky proteins are identified and then removed from the process so sticky proteins do not influence the outcome of the PPCM matrix nor the estimate from algorithms such as apComplex.

Usage

recordSticky(simMat, vSticky)

Arguments

simMat The simulated AP-MS data
vSticky The pre-scribed vector of sticky proteins

Details

The recordSticky function will return both the sticky proteins that are put into the function at the beginning as well as proteins which interact with a large number of other proteins.

Value

The return value is a vector of all the proteins that are considered to be sticky in the simulation.

Author(s)

Tony Chiang


[Package simulatorAPMS version 1.2.1 Index]