SD {affycomp} | R Documentation |
These functions create assessments, figures, and tables for expression standard errors
affycomp.figure7(l,main="Figure 7") affycomp.compfig7(l,method.names=as.character(1:length(l)), main="Figure 7") tableSD(l,method.names=NULL)
l |
a list of lists with the necessary components to create the Figure. See details. |
method.names |
a character vector with the names of the expression measures methodologies being compared. |
main |
title of the Figure. |
This uses the dilution data. The exprsets need to have standard error
estimates in the se.exprs
slot. Read the vignette for more
details. The functions work similarly to those assessing expression
measures.
All these files need the result of assessSD
Depends on the call.
Rafael A. Irizarry
data(rma.sd.assessment) ##this was produced with affycomp.assess data(lw.sd.assessment) ##this one too affycomp.compfig7(list(rma.sd.assessment,lw.sd.assessment)) affycomp.figure7(rma.sd.assessment)