fullSimEX {simulatorAPMS} | R Documentation |
This is an ISI with proteins not participating in any protein complexes append to the bipartite graph. Usually, these non-participating proteins are not recorded in the ISI, but are needed in experimentation and simulation.
data(fullSimEX)
The format is: num [1:35, 1:10] 1 0 0 0 0 0 0 0 0 0 ... - attr(*, "dimnames")=List of 2 ..$ : chr [1:35] "YAL015C" "YAL017W" "YAL021C" "YAL036C" ... ..$ : chr [1:10] "MBME1" "MBME2" "MBME3" "MBME4" ...
The fullSimEX is the ISI that should be acted upon by the simulation methods of simulatorAPMS. The non-participating proteins will be key in the false positive observations.
data(fullSimEX) ## maybe str(fullSimEX) ; plot(fullSimEX) ...