read.xysfiles {oligo} | R Documentation |
NimbleGen provides XYS files which are read by this function.
read.xysfiles(filenames, phenoData = new("AnnotatedDataFrame"), featureData = NULL, description = NULL, notes = "", verbose = FALSE, tmpdir = tempdir())
filenames |
character vector with filenames. |
phenoData |
phenoData |
featureData |
featureData |
description |
description |
notes |
notes |
verbose |
verbose |
tmpdir |
path to the directory that will store the temporary files. |
tmpdir
should be a local directory where temporary files
(created by BufferedMatrix
package) are going to be stored. If
this points to a network drive, the process will be very slow. If it
points to a directory where the user does not have 'write'
permissions, the user will get errors.
|
if Expresssion arrays |
|
if Exon arrays |
|
if SNP arrays |
|
if Tiling arrays |
read.xysfiles
for NimbleGen arrays