discretizeAll {macat} | R Documentation |
perform discretization on all chromosomes and write python flat files
discretizeAll(data, margin = 10)
data |
MACATData Object |
margin |
symmetric quantile in percent |
The filename for the python flat files are
discrete_seqs_margin_<margin>_chrom_<chrom>.py
where <chrom> and <margin>
are the names of the chromosome and the margin used for discretization.
For details on the discretization see discretize
.
produces python flat file
The MACAT Development team
# !!! takes some time !!! ## Not run: #loaddatapkg("stjudem") data(stjd) discretizeAll(stjd, margin=10) ## End(Not run)