viewstat {fbat}R Documentation

view statistics for a marker

Description

view statistics for a marker

Usage

viewstat(fbatObject, markerName)

Arguments

fbatObject Object for Family Based Association Tests. See references.
markerName name(s) of the marker(s) for which statistics is needed

Details

Print various stats for a marker, such as: family size, number of people in the family, number of informative families in the marker, the alleles of marker, scores for marker, expected score for marker, covariance matrix of the score for the marker, Moore-Penrose generealized inverse of covariance matrix and P-value.

Author(s)

Gregory R. Warnes warnes@bst.rochester.edu and Nitin Jain nitin.jain@pfizer.com

References

http://www.biostat.harvard.edu/~fbat/fbat.htm

Examples

  data(CAMP)
  res<-fbat(CAMP)
  viewstat(res, "m709")
  viewstat(res, "m654")
  viewstat(res, "m47")
  viewstat(res, "p46")
  viewstat(res, "p79")
  viewstat(res, "p252")
  viewstat(res, "p491")
  viewstat(res, "p523")

[Package fbat version 1.0.0 Index]