oGtypeExSet-class {GGtools}R Documentation

Class "oGtypeExSet" ~~~

Description

~~ A concise (1-5 lines) description of what the class is. ~~

Objects from the Class

Objects can be created by calls of the form new("oGtypeExSet", snpCalls=list(), dbConns=list(), x) where x is an ExpressionSet instance.

Slots

snpCalls:
Object of class "list" named list of SnpCallSet instances
dbConns:
Object of class "list" list of SQLite connections for SNP annotation structures
assayData:
Object of class "AssayData" from expression data
phenoData:
Object of class "AnnotatedDataFrame" ~~
featureData:
Object of class "AnnotatedDataFrame" ~~
experimentData:
Object of class "MIAME" ~~
annotation:
Object of class "character" ~~
.__classVersion__:
Object of class "Versions" ~~

Extends

Class "ExpressionSet", directly. Class "eSet", by class "ExpressionSet", distance 2. Class "VersionedBiobase", by class "ExpressionSet", distance 3. Class "Versioned", by class "ExpressionSet", distance 4.

Methods

No methods defined with class "oGtypeExSet" in the signature.

Author(s)

VJ Carey <stvjc@channing.harvard.edu>

Examples

# use new("oGtypeExSet", snpCalls=list(Nsp=nspCalls, Sty=styCalls),
#    dbConns=list(), x3pSet)
showClass("oGtypeExSet")

[Package GGtools version 1.4.0 Index]