HMworkflow {GGtools} | R Documentation |
function to bind together genotyping results and expression data
HMworkflow(gzfn, emat, pd, mi, anno)
gzfn |
path to gzipped genotyping results |
emat |
matrix of conforming expression results (colnames match some of those in gzfn) |
pd |
phenoData instance |
mi |
MIAME instance |
anno |
string indicating platform, such as
"hgfocus" |
builds a racExSet-class
instance
builds a racExSet-class
instance
Vince Carey <stvjc@channing.harvard.edu>
data(chr20GGdem) fi = system.file("fileDemos/geno20demo.txt.gz", package="GGtools") HMworkflow(fi, exprs(chr20GGdem)[1:100,], phenoData(chr20GGdem), experimentData(chr20GGdem), "hgfocus")