p0.mom {SAGx}R Documentation

Estimate proportion unchanged genes

Description

The function uses the vector of p-values to estimate p0.

Usage

p0.mom(ps = pvalues)

Arguments

ps the vector of p-values, e.g. from firstpass

Value

the value of p0, the proportion unchanged genes as a list with components

mgf estimate from the mgf method
PRE estimate from the PRE method
experimental1
experimental2

Author(s)

Per Broberg

References

Broberg, P. A new estimate of the proportion unchanged genes, 2005, Genome Biology 5:p10
Broberg, P. A comparative review of estimates of the proportion unchanged genes and the false discovery rate, submitted (2004)


[Package SAGx version 1.7.1 Index]