top.count {Mfuzz} | R Documentation |
This function calculates the number,for which each gene appears to have the top
membership score in the partition matrix of clusters produced by mfuzz
.
top.count(cl)
cl |
object of class “flclust” |
The function generates a vector containing a count for each gene, which is just the number of times that particular gene has acquired the top membership score.
Lokesh Kumar and Matthias E. Futschik (http://itb.biologie.hu-berlin.de/~futschik)
if (interactive()){ data(yeast) # Data pre-processing yeastF <- filter.NA(yeast) yeastF <- fill.NA(yeastF) yeastF <- standardise(yeastF) # Soft clustering and visualisation cl <- mfuzz(yeastF,c=20,m=1.25) top.count(cl) }