plotCluster {beadarray}R Documentation

Clustering of bead position

Description

Performs a clustering on the x and y positions of beads of the same type and displays result

Usage

plotCluster(coords, main = NULL)

Arguments

coords vector of numeric values specifying x and y positions of the beads that we're interested in (this can be found using the 'getProbeCoords' function
main specify a title for the plot

Details

Co-ordinates are used to create a distance matrix via the dist command and then clustered using the ward method. After the clustering we choose to divide the co-ordinates in 8 clusters.

Value

A dendrogram is plotted

Author(s)

Mark Dunning


[Package beadarray version 1.0.0 Index]