This function takes an in silico interactome and a list of Y2H
experimental data (see details) and generates various graph summary
statistics.
complex |
A character vector of the constituent members of the
proteinn complex of interest |
complexBait |
A character vector of those protein members which
were also tested as baits in the y2h experiment |
notBait |
A character vector of those protein members which were
not tested as baits |
avgDegOut |
The average out-degree of the bait proteins of the
complex of interest |
notIsolated |
A character vector of proteins that showed
experimental binary affiliation for some other complex member |
y2hGraph |
An instance of the class graph; a graphNEL induceds
Y2H graph on the protein complex |
popMeanDegree |
The population mean degree derived from the
bait proteins |
edgeProp |
The estimated edge proportions derived between
undirected Y2H edges |
degBait |
A named list; each name corresponds to each member of
the protein complex with the entry the number of proteins to which
it is adjacent |