analysePlate |
Apply a statistic to the data from each well in a plate |
as.all |
Coercion without introduction of NAs |
barploterrbar |
Barplot with error bars. |
closeHtmlPage |
Open and close an HTML file for writing. |
collectdat |
Specialized functions for Dorit Arlt's (DKFZ) proliferation assay project |
colorramp |
Interpolate between colors |
estimateCrosstalkPlate |
Estimate crosstalk between two color channels. |
estimateCrosstalkWell |
Estimate crosstalk between two color channels. |
getDye |
Extract the Dye name (CFP or YFP) from the clone ID by pattern matching |
getElement |
Functions to extract atomic data types (numeric, character) and vectors from an XML tree |
getPradaPar |
Set and query global parameters for functions in the prada package |
getVector |
Functions to extract atomic data types (numeric, character) and vectors from an XML tree |
histStack |
Stacked histogram |
imageMap |
Write an HTML IMG tag together with a MAP image map. |
mapSub2Plate |
Map subplate well ID and subplate ID to 96-well plate well ID |
openHtmlPage |
Open and close an HTML file for writing. |
plotPlate |
Plot a well statistic in false color representation. |
readFCS |
Read an FCS 3.0 file |
readFCSdata |
Auxiliary functions for readFCS |
readFCSgetPar |
Auxiliary functions for readFCS |
readFCSheader |
Auxiliary functions for readFCS |
readFCStext |
Auxiliary functions for readFCS |
readWellXML |
Specialized functions for Dorit Arlt's (DKFZ) proliferation assay project |
saveeps |
Save the contents of the current graphics device to a file |
savepdf |
Save the contents of the current graphics device to a file |
savepng |
Save the contents of the current graphics device to a file |
savetiff |
Save the contents of the current graphics device to a file |
setPradaPars |
Set and query global parameters for functions in the prada package |
shorth |
Midpoint of the shorth |
splitWellName |
Specialized functions for Dorit Arlt's (DKFZ) proliferation assay project |
sqr |
Square |
statWellLocfit |
Calculate a statistic for the data from one well |