EBLOSUM30 |
Amino Acid Substitution matrices |
EBLOSUM35 |
Amino Acid Substitution matrices |
EBLOSUM40 |
Amino Acid Substitution matrices |
EBLOSUM45 |
Amino Acid Substitution matrices |
EBLOSUM50 |
Amino Acid Substitution matrices |
EBLOSUM55 |
Amino Acid Substitution matrices |
EBLOSUM60 |
Amino Acid Substitution matrices |
EBLOSUM62 |
Amino Acid Substitution matrices |
EBLOSUM65 |
Amino Acid Substitution matrices |
EBLOSUM70 |
Amino Acid Substitution matrices |
EBLOSUM75 |
Amino Acid Substitution matrices |
EBLOSUM80 |
Amino Acid Substitution matrices |
EBLOSUM85 |
Amino Acid Substitution matrices |
EBLOSUM90 |
Amino Acid Substitution matrices |
EPAM10 |
Amino Acid Substitution matrices |
EPAM100 |
Amino Acid Substitution matrices |
EPAM110 |
Amino Acid Substitution matrices |
EPAM120 |
Amino Acid Substitution matrices |
EPAM130 |
Amino Acid Substitution matrices |
EPAM140 |
Amino Acid Substitution matrices |
EPAM150 |
Amino Acid Substitution matrices |
EPAM160 |
Amino Acid Substitution matrices |
EPAM170 |
Amino Acid Substitution matrices |
EPAM180 |
Amino Acid Substitution matrices |
EPAM190 |
Amino Acid Substitution matrices |
EPAM20 |
Amino Acid Substitution matrices |
EPAM200 |
Amino Acid Substitution matrices |
EPAM210 |
Amino Acid Substitution matrices |
EPAM220 |
Amino Acid Substitution matrices |
EPAM230 |
Amino Acid Substitution matrices |
EPAM240 |
Amino Acid Substitution matrices |
EPAM250 |
Amino Acid Substitution matrices |
EPAM260 |
Amino Acid Substitution matrices |
EPAM270 |
Amino Acid Substitution matrices |
EPAM280 |
Amino Acid Substitution matrices |
EPAM290 |
Amino Acid Substitution matrices |
EPAM30 |
Amino Acid Substitution matrices |
EPAM300 |
Amino Acid Substitution matrices |
EPAM310 |
Amino Acid Substitution matrices |
EPAM320 |
Amino Acid Substitution matrices |
EPAM330 |
Amino Acid Substitution matrices |
EPAM340 |
Amino Acid Substitution matrices |
EPAM350 |
Amino Acid Substitution matrices |
EPAM360 |
Amino Acid Substitution matrices |
EPAM370 |
Amino Acid Substitution matrices |
EPAM380 |
Amino Acid Substitution matrices |
EPAM390 |
Amino Acid Substitution matrices |
EPAM40 |
Amino Acid Substitution matrices |
EPAM400 |
Amino Acid Substitution matrices |
EPAM410 |
Amino Acid Substitution matrices |
EPAM420 |
Amino Acid Substitution matrices |
EPAM430 |
Amino Acid Substitution matrices |
EPAM440 |
Amino Acid Substitution matrices |
EPAM450 |
Amino Acid Substitution matrices |
EPAM460 |
Amino Acid Substitution matrices |
EPAM470 |
Amino Acid Substitution matrices |
EPAM480 |
Amino Acid Substitution matrices |
EPAM490 |
Amino Acid Substitution matrices |
EPAM50 |
Amino Acid Substitution matrices |
EPAM500 |
Amino Acid Substitution matrices |
EPAM60 |
Amino Acid Substitution matrices |
EPAM70 |
Amino Acid Substitution matrices |
EPAM80 |
Amino Acid Substitution matrices |
EPAM90 |
Amino Acid Substitution matrices |
salign |
Optimal pairwise alignment of two protein sequences. |
salign,AASequence,AASequence-method |
Optimal pairwise alignment of two protein sequences. |
salign,AASequence,AASequenceList-method |
Optimal pairwise alignment of two protein sequences. |
salign,AASequenceList,AASequence-method |
Optimal pairwise alignment of two protein sequences. |
salign,AASequenceList,NULL-method |
Optimal pairwise alignment of two protein sequences. |
salign-methods |
Optimal pairwise alignment of two protein sequences. |
selfalign |
"AASequence" Object representation of a protein Sequence |
selfalign,AASequence,Submatrix-method |
"AASequence" Object representation of a protein Sequence |
seqgrep |
reader for databases in Fasta file format. |
sequlist |
AASequenceList with 66 entries. |
show,AAAlignment-method |
"AAAlignment" result of pairwise sequence alignment. |
show,AAAlphabet-method |
Class "AAAlphabet" Amino Acid Alphabet |
show,AASequence-method |
"AASequence" Object representation of a protein Sequence |
show,Submatrix-method |
Class "Submatrix" Substitution Matrix |
subFromEmboss |
Class "Submatrix" Substitution Matrix |
subFromEmboss,Submatrix,character-method |
Class "Submatrix" Substitution Matrix |
Submatrix |
Class "Submatrix" Substitution Matrix |
Submatrix-class |
Class "Submatrix" Substitution Matrix |
summary,AAAlignment-method |
"AAAlignment" result of pairwise sequence alignment. |