Miscellaneous functions for cDNA microarrays


[Package List] [Top]

User Guides and Package Vignettes

Read overview or browse directory.

Help Pages

bayesFun A function that calculates an odds ratio of each gene in a multi-slide microarray experiment
cor.na Basic Statistical Functions for Handling Missing Values
findID Find ID when given an accession number
gpTools Wrapper function
gsubAnchor Internal marrayTools functions
htmlPage Display gene list as a HTML page
length.na Basic Statistical Functions for Handling Missing Values
log.na Basic Statistical Functions for Handling Missing Values
maBayesian Calculates an Odds Ratio for Each Gene in a Multi-slide Microarray Experiment.
mapGeneInfo Creating URL strings for external database links
maQuality Calculate basic array wide statistics
maQualityMain Calculate basic array wide statistics
maSelectGnames Select genes according to the values of a few different statistics
maStat A function to calculates various statistics
maText Internal marrayTools functions
maTwoSamples Changing signs for two sample analysis
mean.na Basic Statistical Functions for Handling Missing Values
meanFun A function that calculates the average of each gene in a multi-slide microarray experiment
numNAFun A function that calculates the number of NA of each gene in a multi-slide microarray experiment.
opVersionID Determine the operon oligo set ID
order.na Basic Statistical Functions for Handling Missing Values
plot.gene.cluster Internal marrayTools functions
prod.na Basic Statistical Functions for Handling Missing Values
quantile.na Basic Statistical Functions for Handling Missing Values
rm.na Remove missing values
scale.na Basic Statistical Functions for Handling Missing Values
SFGL Creating URL strings for external database links
spotTools Wrapper function
stat.confband.text Rank genes according to the value of a statistic.
stat.gene.cluster Internal marrayTools functions
stat.gnames Sort Genes According to the Value of a Statistic
sum.na Basic Statistical Functions for Handling Missing Values
table2html Display gene list as a HTML page
tablegen Internal marrayTools functions
ttestFun A function that calculates the t-statistics of each gene in a multi-slide microarray experiment.
UCBFGL Creating URL strings for external database links
URLstring Creating URL strings for external database links
var.na Basic Statistical Functions for Handling Missing Values
widget.mapGeneInfo Creating URL strings for external database links
widget.Stat A function to calculates various statistics
widget.TwoSamples Changing signs for two sample analysis