ALL | Acute Lymphoblastic Leukemia Data from the Ritz Laboratory |
Bdists | Distance matrices for the BCR/ABL and NEG subgroups. |
combGOGraph | Combine GO Graphs |
compCorrGraph | A function to compute a correlation based graph from Gene Expression Data |
compGdist | A function to compute the distance between pairs of nodes in a graph. |
distCGO | Distances between GO graphs |
distDGGO | Distances between GO graphs |
enumPairs | Triad Functions |
getGOCategory | Functions to Access GO data. |
getGOChildren | Functions to Access GO data. |
getGOParents | Functions to Access GO data. |
getGOTerm | Functions to Access GO data. |
GOHyperG | Hypergeometric Tests for GO |
GOLeaves | Identify the leaves in a GO Graph |
hasGOannote | Check for GO annotation |
idx2dimnames | Index to Dimnames |
isTriad | Triad Functions |
makeGOGraph | Construct a GO Graph |
Ndists | Distance matrices for the BCR/ABL and NEG subgroups. |
notConn | Find genes that are not connected to the others. |
oneGOGraph | Build a GO graph for one identifier |
reduce2Degreek | Triad Functions |
shortestPath | Shortest Path Analysis |
triad | Triad Functions |
triadCensus | Triad Functions |