Time-Course Multi-Omics data integration


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Documentation for package ‘timeOmics’ version 0.99.15

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dmatrix.spearman.dissimilarity dmatrix.spearman.dissimilarity
getCluster Get variable cluster from (s)PCA, (s)PLS or block.(s)PLS
getNcomp Get optimal number of components
getSilhouette Get Silhouette Coefficient from (s)PCA, (s)PLS or block.(s)PLS clusters
get_demo_cluster get_demo_cluster
get_demo_silhouette Get data for silhouette demo
lmms.filter.lines Filter Linear Profiles from Linear Mixed Model output
plotLong Plot Longitudinal Profiles by Cluster
proportionality Proportionality Distance
timeOmics.simdata Time-Course Simulated data
tuneCluster.block.spls Feature Selection Optimization for block (s)PLS method
tuneCluster.spca Feature Selection Optimization for sPCA method
tuneCluster.spls Feature Selection Optimization for sPLS method
unscale Unscales a scaled data.frame