Detection of cell-cell interaction from single-cell RNA-seq dataset by tensor decomposition

Documentation for package ‘scTensor’ version 1.3.3

scTensor-package	Detection of cell-cell interaction from single-cell RNA-seq dataset by tensor decomposition
CCSParams-class	Class "CCSParams"
cellCellDecomp	Performing scTensor
cellCellDecomp-method	Performing scTensor
cellCellRanks	Rank estimation of the CCI-tensor
cellCellRanks-method	Rank estimation of the CCI-tensor
cellCellReport	HTML report of the result of scTensor
cellCellReport-method	HTML report of the result of scTensor
cellCellSetting	Parameter setting for scTensor
cellCellSetting-method	Parameter setting for scTensor
cellCellSimulate	Parameter Simulate for scTensor
cellCellSimulate-method	Parameter Simulate for scTensor
convertToNCBIGeneID	ID conversion function to create the input matrix for scTensor
GermMale	The matrix which is used as test data of scTensor.
getParam	Get a parameter
getParam-method	Get a parameter
labelGermMale	The vector contains the celltype information and color scheme of GermMale
m	The gene-wise mean vector of Quartz-Seq data.
newCCSParams	New Params
scTensor	Detection of cell-cell interaction from single-cell RNA-seq dataset by tensor decomposition
setParam	Set a parameter
setParam-method	Set a parameter
setParam<-	Set a parameter
setParam<--method	Set a parameter
tsneGermMale	The result of Rtsne against GermMale
v	The gene-wise variance vector of Quartz-Seq data.