High throughput analysis of T cell antigen receptor sequences


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Documentation for package ‘clonotypeR’ version 1.25.0

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clonotypeR-package clonotypeR: High throughput analysis of T cell antigen receptor sequences
clonotypeR clonotypeR: High throughput analysis of T cell antigen receptor sequences
clonotype_table clonotype_table
codon_ids Extra data used to calculate ID numbers in Yassai et al.'s nomenclature.
common_clonotypes common_clonotypes
common_clonotypes-method common_clonotypes
is_unproductive is_unproductive
J_before_FGxG Extra data used to calculate ID numbers in Yassai et al.'s nomenclature.
private_clonotypes private_clonotypes
read_clonotypes read_clonotypes
unique_clonotypes unique_clonotypes
V_after_C Extra data used to calculate ID numbers in Yassai et al.'s nomenclature.
yassai_identifier yassai_identifier
yassai_identifier-method yassai_identifier