Package: Scale4C
Type: Package
Title: Scale4C: an R/Bioconductor package for scale-space
        transformation of 4C-seq data
Version: 1.9.0
Date: 2017-06-06
Author: Carolin Walter
Maintainer: Carolin Walter <carolin.walter@uni-muenster.de>
Imports: methods, grDevices, graphics, utils
Depends: R (>= 3.4), smoothie, GenomicRanges, IRanges,
        SummarizedExperiment
Suggests:
Description: Scale4C is an R/Bioconductor package for scale-space
        transformation and visualization of 4C-seq data. The
        scale-space transformation is a multi-scale visualization
        technique to transform a 2D signal (e.g. 4C-seq reads on a
        genomic interval of choice) into a tesselation in the scale
        space (2D, genomic position x scale factor) by applying
        different smoothing kernels (Gauss, with increasing sigma).
        This transformation allows for explorative analysis and
        comparisons of the data's structure with other samples.
License: LGPL-3
biocViews: Visualization, QualityControl, DataImport, Sequencing,
        Coverage
git_url: https://git.bioconductor.org/packages/Scale4C
git_branch: master
git_last_commit: 8aef9b5
git_last_commit_date: 2019-10-29
Date/Publication: 2020-04-07
NeedsCompilation: no
Packaged: 2020-04-08 03:44:14 UTC; biocbuild
Built: R 4.0.0; ; 2020-04-08 17:52:20 UTC; unix
