A DNA methylation classifier tool for the identification of pediatric brain tumor subtypes

[Up] [Top]

Documentation for package ‘MethPed’ version 1.15.0

Help Pages

checkNA Check missing valus in dataset
MethPed MethPed: a DNA methylation classifier tool for the identification of pediatric brain tumor subtypes.
MethPed_900probes List of 900 probes in the predictor data
MethPed_sample Sample dataset to MethPed package.
plot.methped Plot conditional probability of samples that belongs to different tumor subtypes.
probeMis Missing probe names from training data compared with input samples.
summary.methped Summary of conditional probability or binary classification of samples that belong to different tumor subtypes.