# FHCRC Nelson Lab OperonHumanV3 Annotation Data (OperonHumanV3)

## Documentation for package ‘OperonHumanV3.db’ version 2.4.1

- DESCRIPTION file.

## Help Pages

OperonHumanV3 | Bioconductor annotation data package
OperonHumanV3.db | Bioconductor annotation data package
OperonHumanV3ACCNUM | Map Manufacturer identifiers to Accession Numbers
OperonHumanV3ALIAS2PROBE | Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
OperonHumanV3CHR | Map Manufacturer IDs to Chromosomes
OperonHumanV3CHRLENGTHS | A named vector for the length of each of the chromosomes
OperonHumanV3CHRLOC | Map Manufacturer IDs to Chromosomal Location
OperonHumanV3CHRLOCEND | Map Manufacturer IDs to Chromosomal Location
OperonHumanV3ENSEMBL | Map Ensembl gene accession numbers with Entrez Gene identifiers
OperonHumanV3ENSEMBL2PROBE | Map Ensembl gene accession numbers with Entrez Gene identifiers
OperonHumanV3ENTREZID | Map between Manufacturer Identifiers and Entrez Gene
OperonHumanV3ENZYME | Map between Manufacturer IDs and Enzyme Commission (EC) Numbers
OperonHumanV3ENZYME2PROBE | Map between Enzyme Commission Numbers and Manufacturer Identifiers
OperonHumanV3GENENAME | Map between Manufacturer IDs and Genes
OperonHumanV3GO | Map between Manufacturer IDs and Gene Ontology (GO)
OperonHumanV3GO2ALLPROBES | Map between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
OperonHumanV3GO2PROBE | Map between Gene Ontology (GO) and Manufacturer Identifiers
OperonHumanV3LOCUSID | Map between Manufacturer Identifiers and Entrez Gene
OperonHumanV3MAP | Map between Manufacturer Identifiers and cytogenetic maps/bands
OperonHumanV3MAPCOUNTS | Number of mapped keys for the maps in package OperonHumanV3.db
OperonHumanV3OMIM | Map between Manufacturer Identifiers and Mendelian Inheritance in Man (MIM) identifiers
OperonHumanV3ORGANISM | The Organism information for OperonHumanV3
OperonHumanV3ORGPKG | The Organism information for OperonHumanV3
OperonHumanV3PATH | Mappings between probe identifiers and KEGG pathway identifiers
OperonHumanV3PATH2PROBE | Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
OperonHumanV3PFAM | Map Manufacturer IDs to Pfam IDs
OperonHumanV3PMID | Map between Manufacturer Identifiers and PubMed Identifiers
OperonHumanV3PMID2PROBE | Map between PubMed Identifiers and Manufacturer Identifiers
OperonHumanV3PROSITE | Map Manufacturer IDs to PROSITE ID
OperonHumanV3REFSEQ | Map between Manufacturer Identifiers and RefSeq Identifiers
OperonHumanV3SYMBOL | Map between Manufacturer Identifiers and Gene Symbols
OperonHumanV3UNIGENE | Map between Manufacturer Identifiers and UniGene cluster identifiers
OperonHumanV3UNIPROT | Map Uniprot accession numbers with Entrez Gene identifiers
OperonHumanV3UNIPROT2PROBE | Map Uniprot accession numbers with Entrez Gene identifiers
OperonHumanV3_dbconn | Collect information about the package annotation DB
OperonHumanV3_dbfile | Collect information about the package annotation DB
OperonHumanV3_dbInfo | Collect information about the package annotation DB
OperonHumanV3_dbschema | Collect information about the package annotation DB